Mapped reads for uncultivated Cytophagales bacterium UBA11061 genome ... - SRA

SRX3577524: Mapped reads for uncultivated Cytophagales bacterium UBA11061 genome recovered from SRX117744
1 ILLUMINA (Illumina Genome Analyzer IIx) run: 269,495 spots, 41.2M bases, 20.5Mb downloads

Design: Reads from SRX117744 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA11061 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

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Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Cytophagales bacterium UBA11061 genome recovered from SRX117744

SAMN08020071 • SRS2847253 • All experiments • All runs

Organism: Cytophagales bacterium

Library:

Name: UBA11061_library

Instrument: Illumina Genome Analyzer IIx

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 269,495 spots, 41.2M bases, 20.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR6487761	269,495	41.2M	20.5Mb	2018-02-23

ID:: 4963026

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